PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn152431
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 213aa    MW: 24149.1 Da    PI: 5.4474
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn152431genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like30.58.2e-102348126
     G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                k+rl+Wt eLH+ F +av+qLGG++k
  Achn152431 23 KERLKWTDELHDLFEKAVNQLGGPDK 48
                68**********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.1E-82149IPR009057Homeodomain-like
PfamPF143794.5E-1564105IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MPSRAGRSFD SDTGSGRSDG SGKERLKWTD ELHDLFEKAV NQLGGPDKIP DVQVHSRIFQ  60
QCAQLNEALQ IQKEAERRLS EQLEVQRSLK LKIEAQGRYL ERIQEDLNNR INNAVKPGKA  120
FSPISMLSIC EKSNSNAMES ESDLEIDKAE AMSEEEFRGP KRLRAGDEDV FVPRYMFHSE  180
SFNQSMFLSK RNSFPWSVTS CNLPLMPSLY TL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006429402.12e-53hypothetical protein CICLE_v10013453mg, partial
TrEMBLV4SPR13e-53V4SPR1_9R
STRINGPOPTR_0006s10190.18e-46(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA101012026
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-16G2-like family protein